Computing diversity measures on tripartite graphs. This package first implements a parametrized family of such diversity measures which apply on probability distributions. Sometimes called "True Diversity", this family contains famous measures such as the richness, the Shannon entropy, the Herfindahl-Hirschman index, and the Berger-Parker index. Second, the package allows to apply these measures on probability distributions resulting from random walks between the levels of tripartite graphs. By defining an initial distribution at a given level of the graph and a path to follow between the three levels, the probability of the walker's position within the final level is then computed, thus providing a particular instance of diversity to measure.

Version: | 1.0 |

Depends: | R (≥ 3.2.3), Matrix, data.tree |

Published: | 2017-10-11 |

Author: | Robin Lamarche-Perrin [aut, cre] |

Maintainer: | Robin Lamarche-Perrin <Robin.Lamarche-Perrin at lip6.fr> |

License: | GPL-3 | file LICENSE |

NeedsCompilation: | no |

Materials: | README |

CRAN checks: | triversity results |

Reference manual: | triversity.pdf |

Package source: | triversity_1.0.tar.gz |

Windows binaries: | r-devel: triversity_1.0.zip, r-release: triversity_1.0.zip, r-oldrel: triversity_1.0.zip |

macOS binaries: | r-release (arm64): triversity_1.0.tgz, r-release (x86_64): triversity_1.0.tgz, r-oldrel: triversity_1.0.tgz |

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