gfpop: Graph-Constrained Functional Pruning Optimal Partitioning

Penalized parametric change-point detection by functional pruning dynamic programming algorithm. The successive means are constrained using a graph structure with edges of types null, up, down, std or abs. To each edge we can associate some additional properties: a minimal gap size, a penalty, some robust parameters (K,a). The user can also constrain the inferred means to lie between some minimal and maximal values. Data is modeled by a quadratic cost with possible use of a robust loss, biweight and Huber (see edge parameters K and a). Other losses are also available with log-linear representation or a log-log representation.

Version: 1.0.3
Depends: R (≥ 3.5.0)
Imports: Rcpp (≥ 1.0.0)
LinkingTo: Rcpp
Published: 2021-02-17
Author: Vincent Runge [aut, cre], Toby Hocking [aut], Guillem Rigaill [aut], Daniel Grose [aut], Gaetano Romano [aut], Fatemeh Afghah [aut], Paul Fearnhead [aut], Michel Koskas [ctb], Arnaud Liehrmann [ctb]
Maintainer: Vincent Runge <vincent.runge at univ-evry.fr>
License: MIT + file LICENSE
NeedsCompilation: yes
SystemRequirements: C++11
CRAN checks: gfpop results

Documentation:

Reference manual: gfpop.pdf

Downloads:

Package source: gfpop_1.0.3.tar.gz
Windows binaries: r-devel: gfpop_1.0.3.zip, r-devel-UCRT: gfpop_1.0.3.zip, r-release: gfpop_1.0.3.zip, r-oldrel: gfpop_1.0.3.zip
macOS binaries: r-release (arm64): gfpop_1.0.3.tgz, r-release (x86_64): gfpop_1.0.3.tgz, r-oldrel: gfpop_1.0.3.tgz
Old sources: gfpop archive

Linking:

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