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This R package contains the core code to perform a dynamic TOPMODEL simulation. A related package for processing GIS data to set up dynamic TOPMODEL implementations can be found here.

These two packages are intended as successors to the original Dynamic TOPMODEL implementation in R; the dynatopmodel package. Currently (as a design choice) not all the features of the original package are implemented.

If there is a feature or improvement you want or you experience problems please raise an issue (or better still submit a pull request with alterations or fixes!) rather than contact the maintainers directly in the first instance.

Over time there have been numerous variations on and applications of the R versions of dynamic TOPMODEL, selected references can be found in the Selected References vignette or here

Thanks goes to:

Using the code

Alongside the packages available on CRAN the latest development version can be installed from the git repository from within R using the devtools package:


Prebuild packages of the development version (which may be ahead of CRAN) are available from the r-universe