GeneCycle: Identification of Periodically Expressed Genes

The GeneCycle package implements the approaches of Wichert et al. (2004) <doi:10.1093/bioinformatics/btg364>, Ahdesmaki et al. (2005) <doi:10.1186/1471-2105-6-117> and Ahdesmaki et al. (2007) <doi:10.1186/1471-2105-8-233> for detecting periodically expressed genes from gene expression time series data.

Version: 1.1.5
Depends: R (≥ 2.7.0), MASS, longitudinal (≥ 1.1.3), fdrtool (≥ 1.2.5)
Published: 2021-01-05
Author: Miika Ahdesmaki, Konstantinos Fokianos, and Korbinian Strimmer.
Maintainer: Miika Ahdesmaki <miika.ahdesmaki at gmail.com>
License: GPL (≥ 3)
NeedsCompilation: no
CRAN checks: GeneCycle results

Documentation:

Reference manual: GeneCycle.pdf

Downloads:

Package source: GeneCycle_1.1.5.tar.gz
Windows binaries: r-devel: GeneCycle_1.1.5.zip, r-release: GeneCycle_1.1.5.zip, r-oldrel: GeneCycle_1.1.5.zip
macOS binaries: r-release (arm64): GeneCycle_1.1.5.tgz, r-release (x86_64): GeneCycle_1.1.5.tgz, r-oldrel: GeneCycle_1.1.5.tgz
Old sources: GeneCycle archive

Reverse dependencies:

Reverse suggests: ptest

Linking:

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