CRAN Package Check Results for Package mapmisc

Last updated on 2021-06-19 01:50:24 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.8.0 15.59 323.15 338.74 OK
r-devel-linux-x86_64-debian-gcc 1.8.0 10.67 249.77 260.44 OK
r-devel-linux-x86_64-fedora-clang 1.8.0 377.55 OK
r-devel-linux-x86_64-fedora-gcc 1.8.0 359.53 OK
r-devel-windows-x86_64 1.8.0 19.00 420.00 439.00 OK
r-devel-windows-x86_64-gcc10-UCRT 1.8.0 OK
r-patched-linux-x86_64 1.8.0 14.82 311.33 326.15 OK
r-patched-solaris-x86 1.8.0 569.00 OK
r-release-linux-x86_64 1.8.0 10.37 314.26 324.63 OK
r-release-macos-arm64 1.8.0 ERROR
r-release-macos-x86_64 1.8.0 OK
r-release-windows-ix86+x86_64 1.8.0 27.00 411.00 438.00 OK
r-oldrel-macos-x86_64 1.8.0 OK
r-oldrel-windows-ix86+x86_64 1.8.0 19.00 444.00 463.00 WARN

Check Details

Version: 1.8.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘rgdal’
Flavor: r-release-macos-arm64

Version: 1.8.0
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘rgdal’
Flavor: r-release-macos-arm64

Version: 1.8.0
Check: tests
Result: ERROR
     Running ‘colourScale.R’ [1s/1s]
     Running ‘omerc.R’ [1s/1s]
     Running ‘openmap.R’ [1s/1s]
     Running ‘worldMap.R’ [1s/1s]
    Running the tests in ‘tests/worldMap.R’ failed.
    Last 13 lines of output:
     >
     >
     > #+ themaps, fig.cap='some maps', fig.subcap = c('projectable region', 'projected, with bg','projected, with world countries','projectable madagascar','madagascar')
     > Spackages = c('rgdal', 'rgeos', 'geosphere')
     >
     > #if(all(unlist(mapply(requireNamespace, package=Spackages, MoreArgs=list(quietly=TRUE))))){
     > # library('rgdal')
     >
     > data("worldMap")
     >
     > world = spTransform(worldMap, crsLL)
     Error in spTransform(worldMap, crsLL) :
     package rgdal is required for spTransform methods
     Calls: spTransform -> spTransform
     Execution halted
Flavor: r-release-macos-arm64

Version: 1.8.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'mapmisc.Rnw' using knitr
    Loading required package: sp
    Loading required package: raster
    map images will be cached in D:\temp\Rtmp0IidLN/mapmiscCache
    --- finished re-building 'mapmisc.Rnw'
    
    --- re-building 'north.Rmd' using docco_linear
    Quitting from lines 273-286 (north.Rmd)
    Error: processing vignette 'north.Rmd' failed with diagnostics:
    invalid layer names
    --- failed re-building 'north.Rmd'
    
    make[1]: Entering directory '/d/RCompile/CRANpkg/local/4.0/mapmisc.Rcheck/vign_test/mapmisc/vignettes'
    pandoc --self-contained --to=html5 --css=http://diseasemapping.r-forge.r-project.org/webpage.css --output=north.html north.md
    xelatex -interaction=nonstopmode mapmisc.tex;
    This is XeTeX, Version 3.14159265-2.6-0.99992 (MiKTeX 2.9)
    entering extended mode
    (mapmisc.tex
    LaTeX2e <2016/02/01>
    Babel <3.9n> and hyphenation patterns for 69 languages loaded.
    (D:\Compiler\texmf\tex\latex\base\article.cls
    Document Class: article 2014/09/29 v1.4h Standard LaTeX document class
    (D:\Compiler\texmf\tex\latex\base\size12.clo))
    (D:\Compiler\texmf\tex\latex\graphics\graphicx.sty
    (D:\Compiler\texmf\tex\latex\graphics\keyval.sty)
    (D:\Compiler\texmf\tex\latex\graphics\graphics.sty
    (D:\Compiler\texmf\tex\latex\graphics\trig.sty)
    (D:\Compiler\texmf\tex\latex\00miktex\graphics.cfg)
    (C:\Users\CRAN\AppData\Roaming\MiKTeX\2.9\tex\xelatex\xetex-def\xetex.def)))
    (D:\Compiler\texmf\tex\latex\graphics\color.sty
    (D:\Compiler\texmf\tex\latex\00miktex\color.cfg))
    (D:\Compiler\texmf\tex\latex\framed\framed.sty)
    (D:\Compiler\texmf\tex\latex\base\alltt.sty)
    (D:\Compiler\texmf\tex\latex\geometry\geometry.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\ifpdf.sty)
    (D:\Compiler\texmf\tex\generic\oberdiek\ifvtex.sty)
    (D:\Compiler\texmf\tex\generic\ifxetex\ifxetex.sty)
    (D:\Compiler\texmf\tex\xelatex\xetexconfig\geometry.cfg))
    (D:\Compiler\texmf\tex\latex\hyperref\hyperref.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\hobsub-hyperref.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\hobsub-generic.sty))
    (D:\Compiler\texmf\tex\latex\oberdiek\auxhook.sty)
    (D:\Compiler\texmf\tex\latex\oberdiek\kvoptions.sty)
    (D:\Compiler\texmf\tex\latex\hyperref\pd1enc.def)
    (D:\Compiler\texmf\tex\latex\00miktex\hyperref.cfg)
    (C:\Users\CRAN\AppData\Roaming\MiKTeX\2.9\tex\latex\url\url.sty))
    
    Package hyperref Message: Driver (autodetected): hxetex.
    
    (D:\Compiler\texmf\tex\latex\hyperref\hxetex.def
    (D:\Compiler\texmf\tex\latex\hyperref\puenc.def)
    (D:\Compiler\texmf\tex\generic\oberdiek\stringenc.sty)
    (D:\Compiler\texmf\tex\latex\oberdiek\rerunfilecheck.sty))
    (D:\Compiler\texmf\tex\latex\caption\caption.sty
    (D:\Compiler\texmf\tex\latex\caption\caption3.sty))
    (D:\Compiler\texmf\tex\latex\caption\subcaption.sty)
    (D:\Compiler\texmf\tex\latex\upquote\upquote.sty)
    No file mapmisc.aux.
    *geometry* detected driver: pdftex
    (D:\Compiler\texmf\tex\latex\hyperref\nameref.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\gettitlestring.sty))
    
    Package hyperref Warning: Rerun to get /PageLabels entry.
    
    (D:\Compiler\texmf\tex\generic\oberdiek\se-ascii-print.def) [1]
    Overfull \hbox (18.07022pt too wide) in paragraph at lines 179--179
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(x, crsOut): NULL target CRS commen
    t, falling back to
    
    Overfull \hbox (382.3954pt too wide) in paragraph at lines 197--197
    []\OT1/cmtt/m/n/12 ## [1] "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.387638
    88888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs"[
    ]
    
    Overfull \hbox (382.3954pt too wide) in paragraph at lines 203--203
    []\OT1/cmtt/m/n/12 ## [1] "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.387638
    88888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs"[
    ]
    
    Overfull \hbox (22.18146pt too wide) in paragraph at lines 206--208
    []\OT1/cmr/m/n/12 Maps which can be down-loaded are shown at []$\OT1/cmtt/m/n/1
    2 http : / / diseasemapping . r-[]forge . r-[]project .
    [2]
    Overfull \hbox (376.2204pt too wide) in paragraph at lines 244--244
    []\OT1/cmtt/m/n/12 ## [1] "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.387638
    88888889 +k=0.9999079 +x_0=155000 +y_0=463000 +datum=WGS84 +units=m +no_defs"[]
    
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 271--272
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 273--273
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 283--284
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 285--285
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (42.77023pt too wide) in paragraph at lines 289--289
    [][]\OT1/cmtt/m/n/12 plot[][](nldElev,[][]add[][]=[][]TRUE[][],[][]col[][]=[][]
    terrain.colors[][]([][]8[][]),[][]alpha[][]=[][]0.6[][],[][]legend.mar[][]=[][]
    2[][],[] []legend.line[][]=[][]0[][],)[][]
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 294--295
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 296--296
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    [3] <use "figure/simpleMap-1.png" > <use "figure/simpleMap-2.png" >
    <use "figure/simpleMap-3.png" > [4] <use "figure/meuseLegends-1.png" >
    <use "figure/meuseLegends-2.png" > <use "figure/meuseLegends-3.png" >
    (\RCompile\recent\R-4.0.5\share\texmf\tex\latex\omscmtt.fd)
    Overfull \hbox (5.72021pt too wide) in paragraph at lines 397--398
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(theCentre, crsLL): NULL target CRS
     comment, falling
    
    Overfull \hbox (5.72021pt too wide) in paragraph at lines 399--400
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(theCentreSp, qq): NULL source CRS
    comment, falling
    
    Overfull \hbox (18.07022pt too wide) in paragraph at lines 401--401
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(x, crsOut): NULL target CRS commen
    t, falling back to
    [5]
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 423--424
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 425--425
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 435--436
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 437--437
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    [6] <use "figure/rotatedMap-1.png" > <use "figure/rotatedMap-2.png" >
    Overfull \hbox (18.07022pt too wide) in paragraph at lines 460--461
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(x, crsOut): NULL source CRS commen
    t, falling back to
    
    Overfull \hbox (18.07022pt too wide) in paragraph at lines 462--462
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(x, crsOut): NULL target CRS commen
    t, falling back to
    [7]
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 481--482
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 483--484
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 485--485
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xsp, CRSobj = crs(mapOrig)): NULL
    target CRS comment,
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 498--499
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 500--501
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 502--502
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xsp, CRSobj = crs(mapOrig)): NULL
    target CRS comment,
    <use "figure/inset-1.png" > <use "figure/inset-2.png" > [8] [9] (mapmisc.aux)
    
    LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.
    
     )
    (see the transcript file for additional information)
    Output written on mapmisc.pdf (9 pages).
    Transcript written on mapmisc.log.
    xelatex -interaction=nonstopmode mapmisc.tex
    This is XeTeX, Version 3.14159265-2.6-0.99992 (MiKTeX 2.9)
    entering extended mode
    (mapmisc.tex
    LaTeX2e <2016/02/01>
    Babel <3.9n> and hyphenation patterns for 69 languages loaded.
    (D:\Compiler\texmf\tex\latex\base\article.cls
    Document Class: article 2014/09/29 v1.4h Standard LaTeX document class
    (D:\Compiler\texmf\tex\latex\base\size12.clo))
    (D:\Compiler\texmf\tex\latex\graphics\graphicx.sty
    (D:\Compiler\texmf\tex\latex\graphics\keyval.sty)
    (D:\Compiler\texmf\tex\latex\graphics\graphics.sty
    (D:\Compiler\texmf\tex\latex\graphics\trig.sty)
    (D:\Compiler\texmf\tex\latex\00miktex\graphics.cfg)
    (C:\Users\CRAN\AppData\Roaming\MiKTeX\2.9\tex\xelatex\xetex-def\xetex.def)))
    (D:\Compiler\texmf\tex\latex\graphics\color.sty
    (D:\Compiler\texmf\tex\latex\00miktex\color.cfg))
    (D:\Compiler\texmf\tex\latex\framed\framed.sty)
    (D:\Compiler\texmf\tex\latex\base\alltt.sty)
    (D:\Compiler\texmf\tex\latex\geometry\geometry.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\ifpdf.sty)
    (D:\Compiler\texmf\tex\generic\oberdiek\ifvtex.sty)
    (D:\Compiler\texmf\tex\generic\ifxetex\ifxetex.sty)
    (D:\Compiler\texmf\tex\xelatex\xetexconfig\geometry.cfg))
    (D:\Compiler\texmf\tex\latex\hyperref\hyperref.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\hobsub-hyperref.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\hobsub-generic.sty))
    (D:\Compiler\texmf\tex\latex\oberdiek\auxhook.sty)
    (D:\Compiler\texmf\tex\latex\oberdiek\kvoptions.sty)
    (D:\Compiler\texmf\tex\latex\hyperref\pd1enc.def)
    (D:\Compiler\texmf\tex\latex\00miktex\hyperref.cfg)
    (C:\Users\CRAN\AppData\Roaming\MiKTeX\2.9\tex\latex\url\url.sty))
    
    Package hyperref Message: Driver (autodetected): hxetex.
    
    (D:\Compiler\texmf\tex\latex\hyperref\hxetex.def
    (D:\Compiler\texmf\tex\latex\hyperref\puenc.def)
    (D:\Compiler\texmf\tex\generic\oberdiek\stringenc.sty)
    (D:\Compiler\texmf\tex\latex\oberdiek\rerunfilecheck.sty))
    (D:\Compiler\texmf\tex\latex\caption\caption.sty
    (D:\Compiler\texmf\tex\latex\caption\caption3.sty))
    (D:\Compiler\texmf\tex\latex\caption\subcaption.sty)
    (D:\Compiler\texmf\tex\latex\upquote\upquote.sty) (mapmisc.aux)
    *geometry* detected driver: pdftex
    (D:\Compiler\texmf\tex\latex\hyperref\nameref.sty
    (D:\Compiler\texmf\tex\generic\oberdiek\gettitlestring.sty)) (mapmisc.out)
    (mapmisc.out) (D:\Compiler\texmf\tex\generic\oberdiek\se-ascii-print.def)
    [1]
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    []\OT1/cmtt/m/n/12 ## [1] "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.387638
    88888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs"[
    ]
    
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    []\OT1/cmtt/m/n/12 ## [1] "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.387638
    88888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs"[
    ]
    
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    []\OT1/cmr/m/n/12 Maps which can be down-loaded are shown at []$\OT1/cmtt/m/n/1
    2 http : / / diseasemapping . r-[]forge . r-[]project .
    [2]
    Overfull \hbox (376.2204pt too wide) in paragraph at lines 244--244
    []\OT1/cmtt/m/n/12 ## [1] "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.387638
    88888889 +k=0.9999079 +x_0=155000 +y_0=463000 +datum=WGS84 +units=m +no_defs"[]
    
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 271--272
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    [][]\OT1/cmtt/m/n/12 plot[][](nldElev,[][]add[][]=[][]TRUE[][],[][]col[][]=[][]
    terrain.colors[][]([][]8[][]),[][]alpha[][]=[][]0.6[][],[][]legend.mar[][]=[][]
    2[][],[] []legend.line[][]=[][]0[][],)[][]
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    [3] <use "figure/simpleMap-1.png" > <use "figure/simpleMap-2.png" >
    <use "figure/simpleMap-3.png" > [4] <use "figure/meuseLegends-1.png" >
    <use "figure/meuseLegends-2.png" > <use "figure/meuseLegends-3.png" >
    (\RCompile\recent\R-4.0.5\share\texmf\tex\latex\omscmtt.fd)
    Overfull \hbox (5.72021pt too wide) in paragraph at lines 397--398
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(theCentre, crsLL): NULL target CRS
     comment, falling
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(theCentreSp, qq): NULL source CRS
    comment, falling
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(x, crsOut): NULL target CRS commen
    t, falling back to
    [5]
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 425--425
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 437--437
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    [6] <use "figure/rotatedMap-1.png" > <use "figure/rotatedMap-2.png" >
    Overfull \hbox (18.07022pt too wide) in paragraph at lines 460--461
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(x, crsOut): NULL source CRS commen
    t, falling back to
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(x, crsOut): NULL target CRS commen
    t, falling back to
    [7]
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 483--484
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 485--485
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xsp, CRSobj = crs(mapOrig)): NULL
    target CRS comment,
    
    Overfull \hbox (24.24522pt too wide) in paragraph at lines 498--499
    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xpoints, crsLL): NULL target CRS c
    omment, falling back
    
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    []\OT1/cmtt/m/n/12 ## Warning in spTransform(xsp, CRSobj = crs(mapOrig)): NULL
    target CRS comment,
    <use "figure/inset-1.png" > <use "figure/inset-2.png" > [8] [9] (mapmisc.aux)
     )
    (see the transcript file for additional information)
    Output written on mapmisc.pdf (9 pages).
    Transcript written on mapmisc.log.
    make[1]: Leaving directory '/d/RCompile/CRANpkg/local/4.0/mapmisc.Rcheck/vign_test/mapmisc/vignettes'
    make[1]: Entering directory '/d/RCompile/CRANpkg/local/4.0/mapmisc.Rcheck/vign_test/mapmisc/vignettes'
    rm -rf *.md *.tex *.toc *.bbl *.blg *.aux *.out *.log *.spl *tikzDictionary *.md figure/ cache/ *.dvi *.4* *.css *.idv *.lg *.tmp *.xref *.gz my*.bib *.nav *.xml *.vrb *.snm
    make[1]: Leaving directory '/d/RCompile/CRANpkg/local/4.0/mapmisc.Rcheck/vign_test/mapmisc/vignettes'
    SUMMARY: processing the following file failed:
     'north.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64