gen3sis: General Engine for Eco-Evolutionary Simulations

Contains an engine for spatially-explicit eco-evolutionary mechanistic models with a modular implementation and several support functions. It allows exploring the consequences of ecological and macroevolutionary processes across realistic or theoretical spatio-temporal landscapes on biodiversity patterns as a general term.

Version: 1.1
Depends: R (≥ 3.5.0)
Imports: Rcpp (≥ 0.12.16), Matrix, methods, utils, raster, gdistance, sp, stringr, tools, grDevices
LinkingTo: Rcpp, BH
Suggests: knitr, testthat (≥ 2.1.0), rmarkdown, formatR
Published: 2020-08-29
Author: ETH Zürich [cph], Oskar Hagen [aut, cre] (Landscape Ecology, WSL and ETH Zürich, Switzerland), Benjamin Flueck [aut] (Landscape Ecology, WSL and ETH Zürich, Switzerland), Fabian Fopp [aut] (Landscape Ecology, WSL and ETH Zürich, Switzerland), Juliano S. Cabral [aut] (Ecosystem Modeling, Center for Computational and Theoretical Biology, University of Würzburg, Würzburg, Germany), Florian Hartig [aut] (Theoretical Ecology, University of Regensburg, Regensburg, Germany), Mikael Pontarp [aut] (Department of Biology, Lund University, Lund, Sweden), Charles Novaes de Santana [ctb] (Landscape Ecology, WSL and ETH Zürich, Switzerland), Thiago F. Rangel [aut] (Department of Ecology, Universidade Federal de Goiás, Goiás, Brazil), Theo Gaboriau [ctb] (Depatment of Computational Biology, Lausanne University, Switzerland), Loïc Pellissier [aut, ths] (Landscape Ecology, WSL and ETH Zürich, Switzerland)
Maintainer: Oskar Hagen <oskar at hagen.bio>
BugReports: https://github.com/project-Gen3sis/R-package/issues
License: GPL-3
URL: https://github.com/project-Gen3sis/R-package
NeedsCompilation: yes
SystemRequirements: C++11
Materials: README
CRAN checks: gen3sis results

Downloads:

Reference manual: gen3sis.pdf
Vignettes: Creating Configuration
Creating input landscape for gen3sis
Designing Landscapes
Introducing gen3sis
Package source: gen3sis_1.1.tar.gz
Windows binaries: r-devel: gen3sis_1.1.zip, r-release: gen3sis_1.1.zip, r-oldrel: gen3sis_1.1.zip
macOS binaries: r-release: gen3sis_1.1.tgz, r-oldrel: gen3sis_1.1.tgz
Old sources: gen3sis archive

Linking:

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