CRAN Package Check Results for Package FamEvent

Last updated on 2023-12-11 00:49:05 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.0 12.48 146.87 159.35 NOTE
r-devel-linux-x86_64-debian-gcc 3.0 13.19 106.90 120.09 NOTE
r-devel-linux-x86_64-fedora-clang 3.0 204.55 OK
r-devel-linux-x86_64-fedora-gcc 3.0 203.17 OK
r-devel-windows-x86_64 3.0 14.00 123.00 137.00 OK
r-patched-linux-x86_64 3.0 15.70 139.28 154.98 OK
r-release-linux-x86_64 3.0 12.28 138.80 151.08 OK
r-release-macos-arm64 3.0 53.00 OK
r-release-macos-x86_64 3.0 93.00 OK
r-release-windows-x86_64 3.0 17.00 149.00 166.00 OK
r-oldrel-macos-arm64 3.0 59.00 OK
r-oldrel-macos-x86_64 3.0 70.00 OK
r-oldrel-windows-x86_64 3.0 18.00 154.00 172.00 OK

Check Details

Version: 3.0
Check: Rd files
Result: NOTE checkRd: (-1) simfam.Rd:70: Lost braces 70 | The ages at onset correlated within families are generated from the shared frailty model (code{variation = "frailty"}) or the two-gene model (code{variation = "secondene"}), where the residual familial correlation is induced by a frailty or a second gene, respectively, shared within the family. | ^ checkRd: (-1) simfam.Rd:70: Lost braces 70 | The ages at onset correlated within families are generated from the shared frailty model (code{variation = "frailty"}) or the two-gene model (code{variation = "secondene"}), where the residual familial correlation is induced by a frailty or a second gene, respectively, shared within the family. | ^ checkRd: (-1) simfam_c.Rd:35: Lost braces 35 | Inverse of variance for the frailty distribution. Dependence within families decreases with depend value. Default is \code{NULL}. Positive real values should be specified when \code{variation="frailty"}. With \code{competing = TRUE}, two values shoud be specified for each event when \code{frailty.dist = "gamma"} or \code{frailty.dist = "lognormal"}, three values should be specified with code{frailty.dist = "cgamma"} or \code{frailty.dist = "clognormal"}. The first two values represent the inverse of variance for each event and the thir value represents the correlation between the two events. | ^ checkRd: (-1) simfam_c.Rd:46: Lost braces 46 | When code{competing = TRUE}, list of two vectors of baseline parameters for each event should be specified. For example, \code{base.parms=list(c(lambda1, rho1), c(lambda2, rho2))} should be specified for \code{base.dist=c("Weibull", "Weibull")}. | ^ checkRd: (-1) simfam_c.Rd:50: Lost braces 50 | When code{competing = TRUE}, list of two vectors of regression coefficients for each event should be specified. | ^ checkRd: (-1) simfam_c.Rd:81: Lost braces 81 | The ages at onset correlated within families are generated from the shared frailty model (code{variation = "frailty"}) or the two-gene model (code{variation = "secondene"}), where the residual familial correlation is induced by a frailty or a second gene, respectively, shared within the family. | ^ checkRd: (-1) simfam_c.Rd:81: Lost braces 81 | The ages at onset correlated within families are generated from the shared frailty model (code{variation = "frailty"}) or the two-gene model (code{variation = "secondene"}), where the residual familial correlation is induced by a frailty or a second gene, respectively, shared within the family. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc